Investigation into the mechanism of regulation of nicotinic acetylcholine receptors
POLS-2020/37/K/NZ3/04098
Neurological disorders such as Alzheimer’s disease, schizophrenia, and Parkinson’s disease, in addition to drug addiction have long been linked to the cholinergic system, and specifically nicotinic acetylcholine receptors. These receptors bind a chemical signal (neurotransmitters) and convert it to an electrical signal (ion conductance). They belong to a class of pentameric ligand-gated ion channels composed of five individual similar or sometimes identical protein subunits that form an ion channel. They have a conserved general structure which includes three domains. The extracellular domain, the protein region located outside of the cell, contains the neurotransmitter binding site. The transmembrane domain forms the ion channel pore that selectively allows ions to flow along their concentration gradient. The intracellular domain, the protein region inside of the cell, is thought to be primarily involved in the regulation and trafficking of the receptor. This family of receptors is involved in all major functions of the central nervous system. An enhanced understanding of the mechanisms for functional modulation, in addition to the structural determination of the neurotransmitter binding site, resulted in many pharmacological advances. Yet the numerous years of research have not produced any robust therapies for the maledictions caused by a dysfunction of nicotinic acetylcholine receptors.
This project expressly aims to study the mechanism(s) of functional regulation of nicotinic acetylcholine receptors through their intracellular domain, for which very little is known. Targeting the regulatory system of these receptors may form the basis for developing new therapeutics against neurological disorders.
Within the project a protein composed of an intracellular domain of nicotinic acetylcholine receptors linked to a soluble homologous protein will be created. Using this soluble linked-protein as a tool to identify proteins which interact with the intracellular domain, this project will determine novel targets for current pharmaceutical therapeutic objectives. These newly discovered targets will generate more successful remedies for neurological disorders such as Alzheimer’s and schizophrenia.
Additionally this project will study the mechanisms of action of the identified regulatory proteins. The subtype selective regulation may be identified by studying the role that the various subunit compositions of the receptor, otherwise known as stoichiometry, play in regulatory protein binding. Understanding the intricate mechanism of receptor regulation is important to combat neurodegenerative diseases. Through the development of small single-domain antibodies, nanobodies, against specific receptor stoichiometries this project will answer questions about regulatory differences and develop an understanding of regulatory mechanisms. These same nanobodies will also be used in the future projects as tools to properly localize given stoichiometries in the brain, creating a translational bridge between the biochemical mechanisms of regulation to the neurobiological system composition.
Understanding the mechanisms of regulation of nicotinic acetylcholine receptors, an aspect that has thus far remained elusive, is the key to developing efficient therapeutics for neurological disorders. This proposal attempts to develop such an understanding in the hope that a more effective forthcoming pharmaceutical approach may arise as a result.
Results
The chimeras of the first work plan were generated and with stable cell-lines to produce the proteins. Multiple production iterations in various conditions were attempted to isolate the chimeras, with little success at achieving a soluble pentamer. Therefore, the final stage of the work plan does not appear to be feasible.
Multiple mutants have been generated for the second work plan, which have highlighted key residues for proper expression of these chimeric constructs. An a4/a4 interface has successfully been created. A synthetic nanobody library has been created and nanobodies targeting potentially three of the four planned interfaces have been created. Two have been fully characterized, while another is undergoing characterization. Rather than reinforcing the first work plan, one of the nanobodies was used in immunoprecipitation studies in attempts to make up for the lack of feasability in the final stage of work plan 1. Unforutunately it did not isolate enough receptor to identify other proteins. The remaining nanobodies will also be attempted in immunoprecipitation studies.
Team Members
Master's Student
Equipment
Equipment that was purchased as a result of this funding:
- Chromatography System
- ÄKTA Go
- Refrigerator for storing ÄKTA system
- Stationary Computer
- Laptop
Dissemination Events
2023-09-[18-20]:
Weronika Nowak presented a poster at the Single-Domain Antibodies conference in Paris, France.
Nine people stopped to discuss the poster.
2023-06-[14-16]:
Weronika Nowak presented a poster at the Nano(&)BioMateriały – od teorii do aplikacji conference.
Four people stopped to discuss the poster.
2023-03-03:
Open Day: Hosted a workshop entitled: Visualization methods and protein analysis.
3x(8/8) Attendees
2023-02-20:
dr Dorota Nemecz presented her abstract at the Biophysical Society Annual Meeting in San Diego. @13:45 Exhibit Hall BC Poster#:LB75.
Seven people stopped to discuss the poster.
2023-01-13:
Noc Biologów: Drs Dorota and Ákos Nemecz partipated in the Polish biology night event at UMK w Toruniu (Neurons & Underwater Playground). (10/10 Attendees each)
dr Dorota Nemecz hosted a video competition: Dziękujemy za niepalenie (2 Submissions), and hosted a Lab-Escape event (2 groups of 6).
2022-10-27:
Departmental Seminar presented by Dr. Ákos Nemecz @10am Room C226
12 Attendees
2021-06-21:
Dr. Ákos Nemecz presented the POLS project at the NCN Basic Research Program promotional event
This project expressly aims to study the mechanism(s) of functional regulation of nicotinic acetylcholine receptors through their intracellular domain, for which very little is known. Targeting the regulatory system of these receptors may form the basis for developing new therapeutics against neurological disorders.
Within the project a protein composed of an intracellular domain of nicotinic acetylcholine receptors linked to a soluble homologous protein will be created. Using this soluble linked-protein as a tool to identify proteins which interact with the intracellular domain, this project will determine novel targets for current pharmaceutical therapeutic objectives. These newly discovered targets will generate more successful remedies for neurological disorders such as Alzheimer’s and schizophrenia.
Additionally this project will study the mechanisms of action of the identified regulatory proteins. The subtype selective regulation may be identified by studying the role that the various subunit compositions of the receptor, otherwise known as stoichiometry, play in regulatory protein binding. Understanding the intricate mechanism of receptor regulation is important to combat neurodegenerative diseases. Through the development of small single-domain antibodies, nanobodies, against specific receptor stoichiometries this project will answer questions about regulatory differences and develop an understanding of regulatory mechanisms. These same nanobodies will also be used in the future projects as tools to properly localize given stoichiometries in the brain, creating a translational bridge between the biochemical mechanisms of regulation to the neurobiological system composition.
Understanding the mechanisms of regulation of nicotinic acetylcholine receptors, an aspect that has thus far remained elusive, is the key to developing efficient therapeutics for neurological disorders. This proposal attempts to develop such an understanding in the hope that a more effective forthcoming pharmaceutical approach may arise as a result.
Multiple mutants have been generated for the second work plan, which have highlighted key residues for proper expression of these chimeric constructs. An a4/a4 interface has successfully been created. A synthetic nanobody library has been created and nanobodies targeting potentially three of the four planned interfaces have been created. Two have been fully characterized, while another is undergoing characterization. Rather than reinforcing the first work plan, one of the nanobodies was used in immunoprecipitation studies in attempts to make up for the lack of feasability in the final stage of work plan 1. Unforutunately it did not isolate enough receptor to identify other proteins. The remaining nanobodies will also be attempted in immunoprecipitation studies.
- ÄKTA Go
- Refrigerator for storing ÄKTA system
- Stationary Computer
Nine people stopped to discuss the poster.
Four people stopped to discuss the poster.
3x(8/8) Attendees
Seven people stopped to discuss the poster.
dr Dorota Nemecz hosted a video competition: Dziękujemy za niepalenie (2 Submissions), and hosted a Lab-Escape event (2 groups of 6).
12 Attendees